TABLE 2.
Sequencea | % nucleotide identity |
|||
---|---|---|---|---|
M12 vs M0 | M24 vs M12 | M36 vs M24 | M48 vs M36 | |
Complete genome | 99.7 | 99.7 | 99.8 | 99.3 |
Complete ORF1 | 99.9 | 99.7 | 99.9 | 99.2 |
Methyltransferase | 99.6 | 99.3 | 98.5 | 98.5 |
Y domain | 99.7 | 98.8 | 99.7 | 99.1 |
Papain-like cysteine protease | 99.8 | 100 | 99.8 | 98.8 |
PPR | 100 | 99.4 | 99.4 | 98.5 |
X domain | 100 | 99.6 | 99.0 | 99.2 |
Helicase | 100 | 100 | 100 | 99.6 |
RdRp | 99.9 | 100 | 100 | 99.5 |
Complete ORF2 | 99.9 | 99.9 | 100 | 99.9 |
ORF2-S | 100 | 100 | 100 | 99.9 |
ORF2-M | 99.8 | 99.7 | 100 | 99.8 |
ORF2-P | 99.7 | 99.8 | 99.8 | 99.8 |
ORF3 | 100 | 100 | 100 | 100 |
PPR, polyproline region; RdRp, RNA-dependent RNA polymerase.