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. Author manuscript; available in PMC: 2015 Sep 26.
Published in final edited form as: Biochem Biophys Res Commun. 2014 Sep 6;452(3):813–816. doi: 10.1016/j.bbrc.2014.09.003

Table 1.

Comparison of forces involved in the interactions of thrombin with allosteric ligands.

Ligand Z × Ψ ΔGionica KD,nonionic ΔGnonionicb Reference
kcal/mol mM kcal/mol
Hirudin peptide (Hir55–65) 1.06 −1.19c nad na 19
Thrombomodulin with CSe 4.8 −5.77 0.0125 −6.66 19
Thrombomodulin without CS 2.2 −2.34 0.000708 −8.36 19
Glycocalicin (Soluble GPIbα) 4.2 −4.73 2.88 −3.45 20
Glycocalicin (Soluble GPIbα) 4.6 −5.17c na na 21
Heparin 4.8 −5.4 53.3 −1.73 16
SbO4L −4.85 ±0.43 f −5.45 2.14 ±0.26 −3.64 this work
a

free energy of binding at 150 mM NaCl arising from ionic interactions.

b

free energy of binding at 1 M NaCl arising from non-ionic interactions.

c

calculated from slope measured by authors.

d

not available.

e

chondroitin sulfate.

f

standard error obtained from linear regression.