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. 2014 Sep 23;2:e576. doi: 10.7717/peerj.576

Table 1. Relative CPU times for each package to process the n = 4, 10% synthetic dataset in Fig. 5.

Package CPU time
PoissonSeq 0.38
QLSpline 16.45
edgeR 0.28
Polyfit-edgeR 0.32
DESeq 1.00
Polyfit-DESeq 1.07
DESeq2 0.82