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Likelihood ratio test for PAML site models within Wallaby
| Model | Parameters | lnL | 2ΔlnL (LRT) |
|---|---|---|---|
| M0 | ω: = 0.65464 | -1673.250363 | NA |
| M1a | p0: 0.57003 p1: 0.42997 | -1576.668729 | |
| ω0: 0.09616 ω1: 1.00000 | |||
| M2a | p0: 0.49130 p1: 0.31322 p2: 0.19547 | -1556.441999 | M1a vs. M2a 40.45346 (p = 1.643E-09) |
| ω0: 0.10488 ω1: 1.00000 ω2: 3.48389 | |||
| M7 | p = 0.33061 q = 0.37447 | -1581.277897 | |
| M8 | p0 = 0.74935 p = 0.55372 q = 1.09725 | -1560.301816 | M7 vs. M8 41.952162 (p = 7.765E-10 ) |
| (p1 = 0.25065) ω1 = 2.75722 |
