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. 2014 Sep 29;9(9):e106894. doi: 10.1371/journal.pone.0106894

Table 1. Primers used for qPCR expression analysis of threespine stickleback genes.

Target Gene name Ensembl gene ID Primer sequences °C E (%) Reference
ATP1A3b ATPase, Na+/K+ transporting, alpha 3b polypeptide ENSGACG00000009524 F: AGCCGAGATCCCCTTCAACTCCA 60 99.07 This study
R: GCTCCTTCCCCTGCACCAGGA
CFTR Cystic fibrosis transmembrane conductance regulator ENSGACG00000009039 F: GCAGGCCTCTTCTTCACCAA 58 98.51 McCairns et al. (2009)
R: TCCAGATAGAGGCTGATGTTCTTG
KCNH4 Potassium voltage-gated channel subfamily H member 4 ENSGACG00000008648 F: CACAGTGACCTCTCTGGTGC 60 99.29 This study
R: AGACATGAGCAGGGTCAGGA
HSP70 Heat shock protein 70 ENSGACG00000013048 F: ATCGGTATTGACCTGGGCAC 60 99.20 This study
R: GGTATCGGTGAACGCCACAT
Reference
EF1α Elongation factor 1 ENSGACG00000002182 F: CATTGTCACTTACCTGAATCACATGA 60 99.26 McCairns et al. (2009)
R: TGTGGCATTTAACAACATTTCCA
GADPH Glyceraldehyde-3-phosphate dehydrogenase ENSGACG00000005864 F: CAAACCGTTGGTGACAGTATTTG 60 99.9 Sanago et al. (2011)
R: GCACTGAGCATAAGGACACATCTAA