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. 2014 Sep 17;11:168. doi: 10.1186/1743-422X-11-168

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© Mans et al.; licensee BioMed Central Ltd. 2014

This article is published under license to BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Phylogenetic analysis of unassigned norovirus (NoV) recombinants. Neighbor-joining phylogenetic analysis of A) the complete polymerase gene (1533 bp) of Bushbuckridge 6387 (GII.P NA/GII.3), B) the complete capsid (1623 bp) gene of NoV GII.4 variants and, C) the 540 amino acid sequence encoded by the capsid gene of the NoV GII.4 variants. For the amino acid tree the evolutionary distances were computed using the Poisson correction method and are in the units of the number of amino acid substitutions per site. The NoV reference strains are indicated by GenBank accession numbers as well as GII.4 variant names and the strains identified in this study are shown in bold. Statistical significance was evaluated with a 1000 bootstrap replicates and bootstrap support of >70% is indicated. The scale bar represents nucleotide or amino acid substitutions per site.