Table 3.
Comparison of different model selection approaches with all the SNPs in the NPHS-II study
| Gene | SNPs | Mean log of fibrinogen | Rank of P value | Conditional regression analysis | Adjusted R2 | Mallows’ Cp | RMS residuals | AIC | AICc | BIC | Cross- validation | Stepwise regression using AIC | Stepwise regression using P = 0.1a |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| FGB | rs7673587 | −0.0066 | 12 | ||||||||||
| rs4508864 | 0.0300**** | 1 | X | X | |||||||||
| rs1800791 | −0.0020 | 16 | |||||||||||
| rs1800790 | 0.0297**** | 2 | X | X | X | X | X | −2768.462 | 2.01e – 08 | ||||
| rs1800788 | −0.0120* | 8 | |||||||||||
| rs4220 | 0.0307**** | 3 | |||||||||||
| rs4463047 | −0.0095 | 11 | |||||||||||
| FGA | Taq1 | −0.0093* | 9 | ||||||||||
| rs2070022 | −0.0031 | 15 | |||||||||||
| rs2070018 | −0.0077 | 13 | |||||||||||
| rs2070016 | 0.0304**** | 4 | |||||||||||
| rs2070011 | −0.0135**** | 5 | X | X | X | X | X | X | X | −2773.900 | 0.006 | ||
| rs7659613 | −0.0124** | 6 | |||||||||||
| rs7659024 | −0.0094* | 10 | |||||||||||
| FGG | rs1118823 | −0.0042 | 14 | ||||||||||
| rs1800792 | 0.0114** | 7 |
The best-subset models cross (X) denotes inclusion in the best model
AIC Akaike’s information criterion, BIC Bayesian information criterion; RMS root mean square; AIC given;
P value are shown;
<0.05;
<0.01;
<0.001;
<0.0001