Table 3. Functional annotation of the C. heterophylla Fisch transcriptome.
Annotated databases | All sequences | ≥300 bp | ≥500 bp | ≥1000 bp | ≥2000 bp |
Nr Annotation | 30,549 | 22,862 | 17,076 | 9,259 | 2,089 |
Swiss-Prot Annotation | 18,581 | 14,707 | 11,477 | 6,752 | 1,668 |
COG Annotation | 10,514 | 9,338 | 7,903 | 5,066 | 1,319 |
KEGG Annotation | 17,207 | 13,808 | 10,885 | 6,587 | 1,646 |
GO Annotation | 25,311 | 19,453 | 14,842 | 8,267 | 1,879 |
Total Annotation | 31,844 | 22,889 | 17,080 | 9,260 | 2,089 |
All | 40,941 | 25,779 | 17,757 | 9,323 | 2,095 |