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. 2014 Oct 2;10(10):e1003835. doi: 10.1371/journal.pcbi.1003835

Table 1. Thermo-statistical properties of studied promoters.

Sequence State Inline graphic Inline graphic Inline graphic
alr0705 TSS (−64) 0.219 1.42 0.77
+28 0.288 1.66 0.85
NS 0.054
argC TSS (−19) 0.220 2.10 0.70
+50 0.329 2.50 0.59
NS 0.027 - -
nifB TSS (−221) 0.315 3.47 0.39
−270 0.444 3.81 0.86
NS 0.010 - -
conR TSS (−101) 0.151 1.97 0.58
−30 0.349 2.80 0.91
NS 0.021 - -
furA TSS (−27) 0.449 3.45 1.35
−87 0.390 3.32 1.16
NS 0.014 - -
furB TSS1 (−83) 0.302 2.39 0.86
TSS2 (−60) 0.276 2.30 0.79
−10 0.149 1.68 0.28
NS 0.028 - -
petH TSS1 (−188) 0.199 3.01 0.74
TSS2 (−63) 0.117 2.48 0.33
−220 0.166 2.83 0.40
NS 0.010 - -
petF TSS1 (−93) 0.198 3.03 0.58
TSS2 (−31) 0.268 3.33 0.67
+1 0.101 2.35 0.33
NS 0.010 - -
ntcA TSS1 (−180) 0.098 0.96 0.029
TSS2 (−136) 0.205 1.69 0.73
TSS3 (−39) 0.292 2.05 0.85
NS 0.038 - -

Occupancy probabilities and thermo-statistical magnitudes of the TSS and other relevant sites of the promoter sequences. NS stands for nonspecific sites defined in the discussion section. As already stated, each site is labelled starting from the Inline graphic position on the gene (Inline graphic).