Table 3. Percent of sequences matching HF8 and Lachno2 clusters by fecal source.
Average | Human | Cow | Pig | Dog | Horse |
Bacteroides % of total | 0.29 | 0.058 | 3.4 | 0.097 | 3.3 |
HF8 % of total | 0.11 | 0.001 | 0.013 | 0.011 | 0.001 |
Lachnospiraceae % of total | 17.70 | 0.071 | 12.5 | 0.14 | 7.5 |
Blautia % of total | 1.2 | 0.006 | 0.014 | 1.3 | 0.33 |
Lachno2 % of total | 0.081 | 0.001 | 0.001 | 0.002 | 0.009 |
The 16S rRNA gene was sequences from total DNA extracted from stool or filtered fecal sediment (Human). There were ∼1 million sequences per sample generated and matched to species or family. All fecal samples were collected from the village of Jenipapo, 10 humans, 2 cows, 3 pigs, 3 dogs, and 2 horses. Species of the genus Blautia are one component of the Lachno2 group.