TABLE 2.
Ten most up-regulated and down-regulated genes in undifferentiated 17A preodontoblastic cells deficient for Trps1
Microarray (Affymetrix Mouse Exon 1.0 ST array) was performed with total RNA isolated from Trps1-KD and shScr clonal cell lines.
| Gene name | Entrez ID | Accession | Log fold change (Trps1-KD vs. shScr) |
|---|---|---|---|
| Prl2c3 | 18812 | NM_011118 | 5.05802 |
| Epha7 | 13841 | NM_010141 | 4.44097 |
| Npr3 | 18162 | NM_001039181 | 4.09527 |
| Vcam1 | 22329 | NM_011693 | 3.91533 |
| Igf1 | 16000 | NM_001111275 | 3.6016 |
| Met | 17295 | NM_008591 | 3.55918 |
| Fbn1 | 14118 | NM_007993 | 3.40414 |
| Atp1b1 | 11931 | NM_009721 | 3.32497 |
| Sema3e | 20349 | NM_011348 | 2.96628 |
| Arhgap29 | 214137 | NM_172525 | 2.94997 |
| Gpr141 | 353346 | NM_181754 | −5.07898 |
| Ibsp | 15891 | NM_008318 | −4.14171 |
| Kcnma1 | 16531 | NM_010610 | −3.48697 |
| Smpd3 | 58994 | NM_021491 | −3.36718 |
| Alpl | 249 | NM_007431 | −3.32149 |
| Ptprd | 19266 | NM_001014288 | −3.16874 |
| Galnt3 | 14425 | NM_015736 | −3.03233 |
| Phospho1 | 237928 | NM_153104 | −2.96953 |
| Sema6a | 20358 | NM_018744 | −2.89978 |
| Ramp1 | 51801 | NM_178401 | −2.88211 |