Table 1. Chondrichthyan molecular sequence data in public databases.
| National Center for Biotechnology Information (NCBI) databases 1 | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GenBank | UniProtKB 2 | |||||||||||||||
| Taxonomy | BioProject | BioSample | Gene | GenBank | WMG | EST | EST lib | GSS | GSS
lib |
WGS
(Mbp) |
GEO 3 | SRA | Swiss-
Prot |
TrEMBL | PDB | |
| Chondrichthyes | 7777 | 16 | 75 | 21069 | 55810 | 72 | 192948 | 33 | 28497 | 5 | 2492.3 | 3 | 22 | 276 | 26485 * | 178 |
| Holocephali | 7863 | 3 | 21 | 20201 | 39512 | 8 | 109965 | 6 | 27944 | 1 | 936.9 | 1 | 13 | 12 | 20170 | 0 |
| C. milii | 7868 | 3 | 21 | 20110 | 39232 | 1 | 109965 | 6 | 27944 | 1 | 936.9 | 1 | 13 | 3 | 19989 | 0 |
| Elasmobranchii | 7778 | 13 | 54 | 868 | 16273 | 64 | 82983 | 27 | 553 | 4 | 1555.4 | 2 | 9 | 264 | 6299 | 178 |
| L. erinacea | 7782 | 3 | 7 | 13 | 284 | 1 | 31167 | 5 | 0 | 0 | 1555.4 | 1 | 2 | 6 | 123 | 0 |
| S. canicula | 7830 | 2 | 8 | 13 | 645 | 1 | 1600 | 7 | 0 | 0 | 0 | 1 | 1 | 38 | 283 | 1 |
(WMG) whole mitochondrial genome, (EST) Expressed Sequence Tags, (lib) libraries (GSS) Genome Survey Sequences, (GEO) Gene Expression Omnibus, (WGS) Whole Genome Shotgun, (SRA) Sequence Read Archive, (WMG) whole mitochondrial genomes, (PDB) Protein Data Bank, * includes 16 unidentified fin entries
1 NCBI databases accessed July 25, 2014, 2 Release 2014_07 of 09-Jul-2014, 3 GEO sample accessions