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. 2014 Oct 3;9(10):e108415. doi: 10.1371/journal.pone.0108415

Table 2. Structural features of Darcin and MUP11(a).

Structural feature MUP11 Darcin Strand annotation Inter-strand loop(b) and number of residues in loop
310-helix V12 - K14
β-strand T21 - S26 Y20 - T26 β1 L1, 13aa
310-helix R34 - K36
β-strand F41 - V47 F41 - V47 β2 L2, 3aa
β-strand L52 - H57 S51 - H57 β3 L3, 9aa
β-strand E66 - D72 I67 - K73 β4 L4, 5aa
β-strand E79 - V82 E79 - T83 β5 L5, 3aa
β-strand N88 - T95 S87 - T95 β6 L6, 4aa
β-strand F100 - K109 Y100 - K109 β7 L7, 2aa
β-strand E112 - G121 E112 - G121 β8 L8, 6aa
α-helix S128 - C138 S128 - H141 α1 L9, 4aa
310-helix E139 - H141
310-helix R145 - N147 R145 - N147 *(c)
β-strand Ile148 - Asp150 Ile148 - Asp150 β9
(a)

As defined by the programme Stride [40].

(b)

Loop nomenclature: L1 (between β1 and β2), L2 (β2-β3), L3 (β3-β4), L4 (β4-β5), L5 (β5-β6), L6 (β6-β7), L7 (β7-β8), L8 (β8-β9), L9 (α1-β9).

(c)

Conserved C-terminal 310-helix.