Table 4.
A selection of known alternative splice variants present in two samples of RNA-Seq data.
| Sample | Gene symbol | UCSC variant | FPKM |
|---|---|---|---|
| 1 | ANXA2 | uc002agk.3 | 1.42 |
| 1 | ANXA2 | uc002agl.3 | 190.59 |
| 1 | ANXA2 | uc002agn.3 | <1 |
| 1 | H19 | uc001lva.4 | 1,940.00 |
| 1 | H19 | uc021qby.1 | 13,115.60 |
| 1 | H19 | uc021qbz.1 | 199.08 |
| 1 | IGF2 | uc001lvg.3 | 3,621.01 |
| 1 | IGF2 | uc001lvh.3 | 1.00 |
| 1 | RBPJ | uc003gsa.2 | 2.20 |
| 1 | RBPJ | uc003gsb.2 | <1 |
| 1 | SPRR3 | uc001fax.4 | 15.78 |
| 1 | SPRR3 | uc001faz.4 | 791.66 |
| 5 | ANXA2 | uc002agk.3 | 53.35 |
| 5 | ANXA2 | uc002agl.3 | 78.19 |
| 5 | ANXA2 | uc002agn.3 | 10.37 |
| 5 | H19 | uc001lva.4 | 916.92 |
| 5 | H19 | uc021qby.1 | 7,375.20 |
| 5 | H19 | uc021qbz.1 | 81.87 |
| 5 | IGF2 | uc001lvg.3 | 1,843.93 |
| 5 | IGF2 | uc001lvh.3 | <1 |
| 5 | RBPJ | uc003gsa.2 | 1.99 |
| 5 | RBPJ | uc003gsb.2 | 2.94 |
| 5 | SPRR3 | uc001fax.4 | 11.22 |
| 5 | SPRR3 | uc001faz.4 | 330.50 |
FPKM, fragments per kilobase of transcript per million mapped fragments.