Table 17.

Matrix of non-differentiation probabilities obtained by means of exact tests of population differentiation based on haplotype frequencies for the 14 populations analyzed in the present study.

	CEU	TSI	GBR	FIN	IBS	CHB	JPT	CHS	YRI	LWK	ASW	MXL	PUR	CLM
CEU
TSI	0.2109
GBR	0.1051	0.0765
FIN	0.0062	0.0004*	0.0000*
IBS	0.6345	0.9226	0.9772	0.2932
CHB	0.0000*	0.0000*	0.0000*	0.0000*	0.0057
JPT	0.0000*	0.0000*	0.0000*	0.0000*	0.0002*	0.0000*
CHS	0.0000*	0.0000*	0.0000*	0.0000*	0.0001*	0.0105	0.0000*
YRI	0.0000*	0.0000*	0.0000*	0.0000*	0.0000*	0.0000*	0.0000*	0.0000*
LWK	0.0000*	0.0000*	0.0000*	0.0000*	0.3488	0.0000*	0.0000*	0.0000*	0.0000*
ASW	0.0000*	0.0000*	0.0000*	0.0000*	0.3020	0.0000*	0.0000*	0.0000*	0.0000*	0.1072
MXL	0.0000*	0.0004*	0.0000*	0.0000*	0.4085	0.0000*	0.0000*	0.0000*	0.0000*	0.0000*	0.0004*
PUR	0.0001*	0.0048	0.0006	0.0000*	0.7816	0.0000*	0.0000*	0.0000*	0.0000*	0.0000*	0.0000*	0.0677
CLM	0.0000*	0.0000*	0.0000*	0.0000*	0.5290	0.0000*	0.0000*	0.0000*	0.0000*	0.0000*	0.0001*	0.0437	0.0117

CEU, Utah residents with Northern and Western European ancestry; TSI, Toscani from Italy; GBR, British from England and Scotland; FIN, Finnish from Finland; IBS, Iberian populations from Spain; CHB, Han Chinese from Beijing; CHS, Han Chinese from South China; JPT, Japanese from Tokyo, Japan; YRI, Yoruba from Ibadan, Nigeria; LWK, Luhya from Webuye, Kenya; ASW, people of African ancestry from the southwestern United States; MXL, people of Mexican ancestry from Los Angeles, California; PUR, Puerto Ricans from Puerto Rico; CLM, Colombians from Medellin, Colombia.

Statistically significant F_ST values are in boldface (p < 0.05) or italicized boldface (p < 0.01). Statistically significant values at a 5% significance level after Bonferroni correction are marked with an asterisk (p < 0.0005).