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. 2014 Oct 6;5:476. doi: 10.3389/fimmu.2014.00476

Table 8.

List of all variation sites found at the HLA-G 5′ promoter region, their positions regarding hg19 and the HLA-G gene, and their allele frequencies considering all populations of the 1000Genomes Project (Phase 1).

Genomic SNPid HLA-G Allele 1 Allele 1 Allele 2 Allele 2 Allele 3 Allele 3
position
hg19 (Chr6)
position (reference) frequency frequency frequency
29794317 rs1736936 −1305 G 0.4995 A 0.5005
29794443 rs1736935 −1179 A 0.4466 G 0.5534
29794467 rs3823321 −1155 G 0.8020 A 0.1980
29794482 rs1736934 −1140 A 0.6952 T 0.3048
29794484 rs17875389 −1138 A 0.9493 G 0.0507
29794501 rs3115630 −1121 T 0.0428 C 0.9572
29794524 rs146374870 −1098 G 0.9972 A 0.0028
29794658 rs1632947 −964 G 0.4986 A 0.5014
29794700 rs370338057 −922 C 0.9981 A 0.0019
29794812 rs182801644 −810 C 0.9986 T 0.0014
29794860 rs1632946 −762 C 0.4972 T 0.5028
29794897 rs1233334 −725 G 0.0953 C 0.8550 T 0.0497
29794906 rs2249863 −716 T 0.4963 G 0.5037
29794933 rs2735022 −689 A 0.4963 G 0.5037
29794956 rs35674592 −666 G 0.4981 T 0.5019
29794976 rs17875391 −646 A 0.9749 G 0.0251
29794989 rs1632944 −633 G 0.4995 A 0.5005
29795076 rs201221694 −546/−540 A 0.9744 AG 0.0256
29795081 rs368205133 −541/−533 GA 0.9545 G 0.0455
29795083 rs112940953 −539 A 0.9967 G 0.0033
29795101 rs138987412 −521 C 0.9986 A 0.0014
29795113 rs17875393 −509 C 0.9559 G 0.0441
29795136 rs1736933 −486 A 0.4991 C 0.5009
29795139 rs149890776 −483 A 0.9717 G 0.0283
29795145 rs1736932 −477 C 0.4461 G 0.5539
29795179 rs17875394 −443 G 0.9638 A 0.0362
29795222 rs17875395 −400 G 0.9559 A 0.0441
29795231 rs17875396 −391 G 0.9559 A 0.0441
29795253 rs1632943 −369 C 0.4480 A 0.5520
29795267 rs191630481 −355 G 0.9967 A 0.0033
29795338 . −284 G 0.9991 A 0.0009
29795366 . −256 TC 0.9958 T 0.0042
29795421 rs1233333 −201 G 0.4967 A 0.5033
29795472 . −150 C 0.9977 T 0.0023
29795566 rs17875397 −56 C 0.9503 T 0.0497