Table 2.
Sequences from the three samples
| Sample name | Reads |
Sequences |
3% distance |
5% distance |
||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Raw read | Valid | Valid | Normalization | Chao 1 richness estimation | Shannon diversity | OTU | Good’s coverage (%) | Chao 1 richness estimation | Shannon diversity | OUT | Good’s coverage (%) | |
| CT | 6,554 | 3,172 | 7,548 | 4,791 | 989 | 4.15 | 604 | 95.2 | 586 | 3.65 | 400 | 97.3 |
| OP | 6,871 | 3,645 | 7,265 | 4,791 | 926* | 3.81* | 568* | 95.1 | 533* | 3.34* | 366* | 97.2 |
| OR | 7,345 | 3,873 | 8,030 | 4,791 | 1,023# | 4.09# | 610# | 95.2 | 601# | 3.59# | 408# | 97.2 |
*p<0.05 compared with CT group, #p<0.05 compared with OP group. CT, normal chow diet-fed mice; OP, high-fat diet-induced obesity-prone mice; OR, high-fat diet-induced obesity-resistant mice.