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. 2014 Feb 13;25(2):158–172. doi: 10.1007/s13337-014-0194-z

Table 3.

Genotype constellations of avian RVAs, RVAs from exotic animals, and unusual RVA strains detected in livestock and companion animals with those of selected common bovine, canine/feline, equine, human and porcine RVA strains

Strain Genotypes
VP7 VP4 VP6 VP1 VP2 VP3 NSP1 NSP2 NSP3 NSP4 NSP5
Humans
 RVA/Human-tc/USA/Wa/1974/G1P1A[8] G1 P[8] I1 R1 C1 M1 A1 N1 T1 E1 H1
 RVA/Human-tc/USA/DS-1/1976/G2P1B[4] G2 P[4] I2 R2 C2 M2 A2 N2 T2 E2 H2
 RVA/Human-tc/JPN/AU-l/1982/G3P3[9] G3 P[9] I3 R3 C3 M3 A3 N3 T3 E3 H3
Cattle
 RVA/Cow-tc/USA/NCDV/1967/G6P6[1] G6 P[1] I2 R2 C2 M2 A3 N2 T6 E2 H3
 RVA/Cow-wt/IND/RUBV3/200X/G3P[3] G3 P[3] I2 E2 H3
 RVA/Cow-wt/KOR/K5/2005/G5P[7] G5 P[7] I5 R1 C1 M1 A1 N1 T1 E1 H1
 RVA/Cow-tc/KOR/KJ44/200X/G5P[1] G5 P[1] I1 R1 C1 M2 A1 N1 T1 E1 H1
 RVA/Cow-tc/KOR/KJ75/200X/G5P[5] G5 P[5] I1 R1 C1 M2 A1 N1 T1 E1 H1
 RVA/Cow-tc/KOR/KJ9-1/200X/G6P[7] G6 P[7] I2 R2 C1 M2 A1 N2 T1 E2 H1
 RVA/Cow-tc/KOR/KJ9-2/200X/G6P[7] G6 P[7] I2 R2 C2 M2 A3 N2 T6 E2 H3
 RVA/Cow-tc/KOR/KJ25-1/200X/G8P[7] G8 P[7] I5 R1 C1 M2 A1 N1 T1 E1 H1
 RVA/Cow-wt/IND/BRV-68/200X/G8P[14] G8 P[14] I2 E2
 RVA/Cow-wt/IND/RUBV81/200X/G10P[14] G10 P[14] I2 E2
 RVA/Cow-wt/ARG/B383/1998/G15P[11] G15 P[11] I2 R5 C2 M2 A13 N2 T6 E12 H3
 RVA/Cow-wt/IND/RUBV117/200X/G15P[21] G15 P[21] I2 E2 H3
 RVA/Cow-tc/DEU/993/83/1983/G18P[17] G18 P[17] I4
 RVA/Cow-wt/JPN/Azuk-1/2006/G21P[29] G21 P[29] I2 R2 C2 M2 A13 N2 T9 E2 H3
 RVA/Cow-wt/JPN/Dai-10/2007/G24P[33] G24 P[33] I2 R2 C2 M2 A13 N2 T9 E2 H3
Sheep/goat
 RVA/Goat-tc/BGD/GO34/1999/G6P[1] G6 P[1] I2 R2 C2 M2 A11 N2 T6 E2 H3
 RVA/Goat-tc/KOR/GRV/1998/G3P5[3] G3 P[3] E3
 RVA/Sheep-tc/ESP/OVR762/2002/G8P[14] G8 P[14] I2 R2 C2 M2 A11 N2 T6 E2 H3
 RVA/Sheep-tc/CHN/Lamb-NT/XXXX/G10P[15] G10 P[15] I10 R2 C2 M2 A11 N2 T6 E2 H3
Pigs
 RVA/Pig-tc/USA/OSU/1975/G5P9[7] G5 P[7] I5 R1 C1 M1 A1 N1 T1 E1 H1
 RVA/Pig-tc/MEX/YM/1983/G11P9[7] G11 P[7] I5 R1 C1 M1 A8 N1 T1 E1 H1
 RVA/Pig-wt/CHN/sh0902/2007/G1P[7] G1a P[7] E1
 RVA/Pig-wt/SVN/P21-5/2004/G1P[27] G1 P[27] E9
 RVA/Pig-wt/THA/CMP034/2000/G2P[27] G2 P[27] I5 E9 H1
 RVA/Pig-wt/CAN/AB82/2006/G2P[34] G2b P[34] I5/14 R1 C1 M1 A8 N1 T7 E9 H1
 RVA/Pig-tc/VEN/A131/1998/G3P9[7] G3 P[7] I5 R1 C2 M1 A1 N1 T1 E1 H1
 RVA/Pig-wt/THA/CMP29/08/2008/G3P[13] G3 P[13] I5 R1 C1 M1 A8 N1 T1 E1 H1
 RVA/Pig-wt/THA/CMP48/08/2008/G3P[23] G3 P[23] I5 R1 C1 M1 A8 N1 T1 E1 H1
 RVA/Pig-wt/IND/HP140/2002/G6P[13] G6 P[13] I2 E1 H1
 RVA/Pig-wt/THA/CMP45/08/2008/G9P[23] G9 P[23] I5 R1 C1 M1 A8 N1 T7 E1 H1
 RVA/Pig-wt/VEN/A253/1998/G11P9[7] G11 P[7] R1 C2 M1 A1 N1 T1 E1 H1 R1
 RVA/Pig-wt/IND/RU172/2002/G12P[7] G12 P[7] I5 R1 C1 M1 A1 N1 T1 E1 H1
Horses
 RVA/Horse-wt/IRL/03V04954/2003/G3P[12] G3 P[12] I6 R2 C2 M3 A10 N2 T3 E2 H7
 RVA/Horse-wt/ARG/E403/2006/G14P[12] G14 P[12] I2 R2 C2 M3 A10 N2 T3 E12 H7
 RVA/Horse-wt/ARG/E3198/2008/G3P[3] G3 P[3] I3 R3 C3 M3 A9 N3 T3 E3 H6
 RVA/Horse-tc/JPN/HH-22/1989/G3P[12] G3 P[12] I6 R2 C2 M3 A10 N2 T3 E2 H7
 RVA/Horse-tc/GBR/H-1/1975/G5P9[7] G5 P[7] I5 R1 C1 M1 A8 N1 T1 E1 H1
 RVA/Horse-tc/JPN/OH-4/1982/G6P[5] G6 P[5] I2 R2 C2 M2 A13 N2 T6 E2 H3
 RVA/Horse-tc/GBR/L338/1991/G13P[18] G13 P[18] I6 R9 C9 M6 A6 N9 T12 E14 H11
Cats
 RVA/Cat-tc/AUS/Cat97/1984/G3P[3] G3 P[3] I3 R3 C2 M3 A9 N2 T3 E3 H6
 RVA/Cat-wt/ITA/BA222/2005/G3P[9] G3 P[9] I2 R2 C2 M2 A3 N1 T3 E2 H3
 RVA/Cat-tc/AUS/Cat2/1984/G3P[9] G3 P[9] I3 R3 C2 M3 A3 N1 T6 E3 H3
Birds
 RVA/Turkey-tc/IRL/Ty-3/1979/G7P[17] G7 P[17] I4 E11
 RVA/Turkey-tc/IRL/Ty-1/1979/G17P[17] G17 P[17] I4 N4 E4
 RVA/Pigeon-tc/JPN/PO-13/1983/G18P[17] G18 P[17] I4 R4 C4 M4 A4 N4 T4 E4 H4
 RVA/Chicken-tc/DEU/02V0002G3/2002/G19P[30] G19 P[30] I11 R6 C6 M7 A16 N6 T8 E10 H8
 RVA/Chicken-tc/DEU/06V0661/2006/G19P[31] G19 P[31] I11 H8
 RVA/Turkey-tc/DEU/03V0002E10/2003/G22P[39] G22 P[35] I4 R4 C4 M4 A16 N4 T4 E11 H4
 RVA/Pheasant-tc/DEU/10V0112H5/2010/G23P[37] G23 P[37] I4 R4 C4 M4 A16 N10 T4 E4 H4
Exotic animals
 Non-human primates
  RVA/Simian-tc/ZAF/SA11-H96/1958/G3P5B[2] G3 P[2] I2 R2 C5 M5 A5 N5 T5 E2 H5
  RVA/Simian-tc/ZAF/SA11-Both/1958/G3P5B[2] G3 P[2] I2 R2 C5 M5 A5 N2 T5 E2 H5
  RVA/Simian-tc/ZAF/SA11-30/19/1958/G3P[1] G3 P[1] I2 R2 C5 M5 A5 N5 T5 E2 H5
  RVA/Simian-tc/ZAF/SA11-5S/1958/G3P[1] G3 P[1] I2 R2 C5 M5 A5 N5 T5 E2 H5
  RVA/Simian-tc/USA/RRV/1975/G3P[3] G3 P[3] I2 R2 C3 M3 A9 N2 T3 E3 H6
  RVA/Macaque-tc/USA/YK-1/XXXX/G3P[3] G3 P[3] E3
  RVA/Rhesus-tc/USA/TUCH/2002/G3P[24] G3 P[24] I9 R3 C3 M3 A9 N1 T3 E3 H6
  RVA/Macaque-tc/PTRV/1990/G8P[1] G8 P[1] I2 R2 C2 M2 A3 N2 T6 E2 H3
 Hoofed mammals
  RVA/Antelope-wt/ZAF/RC-18/08/2008/G6P[14] G6 P[14] I2 R2 C2 M2 A11 N2 T6 E2 H3
  RVA/Guanaco-wt/ARG/Rio_Negro/1998/G8P[1] G8 P[1] I2 R5 C2 M2 A11 N2 T6 E12 H3
  RVA/Guanaco-wt/ARG/Chubut/1999/G8P[14] G8 P[14] I2 R5 C2 M2 A3 N2 T6 E12 H3
  RVA/Vicuna-wt/ARG/C75/2010/G8P[14] G8 P[14] I2 R2 C2 M2 A? N2 T6 E3 H?
 Bats
  RVA/Bat-tc/CHN/MSLH14/2012/G3P[3] G3 P[3] I8 R3 C3 M3 A9 N3 T3 E3 H6
  RVA/Bat-tc/KEN/KE4852/07/2007/G25P[6] G25 P[6] I15 R8c C8 M? A? N8 T11 E2 H10
 Rodents
  RVA/Mouse-tc/USA/EB-Po/1982/G16P[16] G16 P[16] I7 R7 C7 M8 A7 N7 T10 E7 H9
  RVA/Mouse-tc/USA/ETD_822/XXXX/G16P[16] G16 P[16] I7 R7 C7 M8 A7 N7 T10 E7 H9
  RVA/Mouse-tc/BRA/EHP/1981/G16P[20] G16 P[20] A7 E7
 Rabbits
  RVA/Rabbit-tc/CHN/N5/1992/G3P[14] G3 P[14] I17 R3 C3 M3 A9 N1 T1 E3 H2
  RVA/Rabbit-tc/ITA/30/96/1996/G3P[14] G3 P[14] I2 R2 C2 M3 A9 N2 T6 E5 H3
 Giant panda
  RVA/Giant panda-tc/CHN/CH-1/2008/G1P[7] G1a P[7] I5 R1 C1 M1 A1 N1 T1 E1 H1

The common bovine, canine/feline, equine, human and porcine RVA strains are italicised

aThe VP7 genes of strains sh0902 and CH-1 were most closely related to each other, and shared low nucleotide sequence identities (< 90 %) with those of other G1 strains [46, 148]

bThe porcine G2 VP7 gene was found to be genetically distinct from those of human G2 strains, and has been referred to as G2-like [16, 17, 61, 71, 75]

cOnly partial nucleotide sequence of the VP1 gene of strain KE4852/07 was obtained, which could not be assigned to any of the known VP1-R genotypes, and therefore, was tentatively designated as R8 [23]

“–” indicates that no nucleotide sequence data were available in the GenBank database

HHS Vulnerability Disclosure