Table 2.
Genotypes of ‘Candidatus Phytoplasma solani’ and their corresponding marker gene annotation. Representative strains/samples for each host plant and the corresponding collection sites are indicated. Strain abbreviations show the host name, the sampling year and a sampling number. Vv: grapevine. Ud: U. dioica. Ca: C. arvensis. Ho: H. obsoletus, Rp: R. panzeri. Ar: A. ribauti, Cr: C. roseus. NÖ- Lower Austria, STMK- Styria, BGLD-Burgenland
| Genotype | tuf | vmp1 | stamp | secY sequ | secY_ Hinf1 | Strain/Sample | Collection site |
|---|---|---|---|---|---|---|---|
| CPsM4_At1 | tuf b2 | Vm_At1 | St_At1 | Se_At1 | SecY 2 | Vv12_273; Ho12_486; CrHo12_650; Ud13_720 | all Rust, BGLD |
| CPsM4_At2 | tuf b2 | Vm_At2 | St_At2 | Se_At1 | SecY 2 | Vv12_274 | Rust, BGLD |
| CPsM4_At3 | tuf a | Vm_At3 | St_At3 | Se_At1 | SecY 2 | Ho13_1006 | Rust, BGLD |
| CPsM4_At4 | tuf a | Vm_At4 | St_At4 | Se_At2 | SecY 2 | Ho13_936; CrHo13_1183 | all Einöd, STMK |
| CPsM4_At5 | tuf a | Vm_At5 | St_At5 | Se_At3 | SecY 2 | Ho13_838 | Rust, BGLD |
| CPsM4_At6 | tuf b1 | Vm_At6 | St_At6 | Se_At5 | SecY 1 | CrHo12_601; CrAr12_722_1 | Falkenstein, NÖ; Langenzersdorf, NÖ |
| CPsM4_At7 | tuf b1 | Vm_At8 | St_At6 | Se_At5 | SecY 1 | Ca13_RF; Vv12_Kn2 | Rust, BGLD; Klosterneuburg, NÖ |
| CPsM4_At8 | tuf b1 | Vm_At10 | St_At6 | Se_At5 | SecY 1 | Vv12_754 | Falkenstein, NÖ |
| CPsM4_At9 | tuf b1 | Vm_At11 | St_At6 | Se_At5 | SecY 1 | Vv12_753 | Falkenstein, NÖ |
| CPsM4_At10 | tuf b1 | Vm_At7 | St_At7 | Se_At5 | SecY 1 | CrHo12_721 | Falkenstein, NÖ |
| CPsM4_At11 | tuf b1 | Vm_At9 | St_At7 | Se_At5 | SecY 1 | Vv12_Ill6 | Illmitz, BGLD |
| CPsM4_At12 | tuf b1 | Vm_At11 | St_At7 | Se_At5 | SecY 1 | Vv12_752; Rp13_700; CrAr12_722_2 | Falkenstein, NÖ; Falkenstein, NÖ; Langenzersdorf, NÖ |
| CPsM4_At13 | tuf b1 | Vm_At10 | St_At8 | Se_At5 | SecY 1 | Vv12_751 | Falkenstein, NÖ |
| CPsM4_At14 | tuf b1 | Vm_At10 | St_At9 | Se_At4 | SecY 1 | Vv12_Kn6 | Klosterneuburg, NÖ |