Table II. Transcription level of genes involved in oligo/polysaccharides utilization in B. longum BBMN68.
Gene | Reads number |
Fold change | Productiona or Domainb | Substratec | |
---|---|---|---|---|---|
CKd | OGe | ||||
BN_1420 | 14909 | 5479 | −3.18 | α-galactosidase | galacto-oligosaccharides |
BN_1446 | 11201 | 3395 | −3.85 | Endo-1,4-β-xylanase | xylan |
BN_1018 | 86 | 23 | −4.36 | Glycosyl hydrolase family 53 | arabinogalactan |
BN_1795 | 736 | 188 | −4.57 | β-glucosidase | β-glucan |
BN_101 | 734 | 184 | −4.66 | α-glucosidase | α-glucan |
BN_221 | 548 | 135 | −4.73 | β-glucosidase | β-glucan |
BN_1363 | 158 | 34 | −5.42 | Pectinesterase | pectin |
BN_1202 | 113338 | 19349 | −6.84 | Endo-α-N-acetylgalactosaminidase | O-glycan |
BN_1162 | 771 | 131 | −6.89 | xylanase | xylan, araban |
a Productions were assigned through blast the amino acid sequence to the UnitProtKB database.
b Domains were identified from the KEGG SSDB database.
c Substrates were deduced from the KEGG ENZYME database.
d BBMN68 was grown in the absence of ox-bile.
e BBMN68 was grown in the presence of 0.75 g l−1 ox-bile.