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. 2014 Sep 17;15(9):458. doi: 10.1186/s13059-014-0458-3

Table 1.

A large proportion of rdd -downregulated genes are stress response-related

Upregulated in rdd Downregulated in rdd
Total differentially expressed accessions (fold change ≥2; P value <0.01 (n) 69 (average fold change = 2.5) 279 (average fold change = 3.5)
Transposable element gene 15 27
Pseudogene 3 4
Unknown protein 9 35
Genes of known function 42 213
Stress response genes identified by MapMan 12 99
All stress response genes identified 25 160