Table 2.

Classification and distribution of the repetitive elements detected among Passiflora edulis BAC-end sequences

Class	Number of elements	Number of masked nucleotides	Percentage of nucleotides
Class I retroelements	3, 401	1, 144, 329	18.47
LTR elements	3,327	1,123,137	18.13
Ty1/Copia	1,606	487,318	7.87
Gypsy/DIRS1	1,706	630,816	10.18
Unclassified LTRs	15	5,003	0.08
LINEs/SINEs	74	21,192	0.34
L1/CIN4	71	21,043	0.34
Other LINEs/SINEs	3	149	0.00
Class II DNA transposons	38	2, 881	0.05
hobo-Activator	7	644	0.01
Tourist/Harbinger	1	47	0.00
Mirage	1	37	0.00
Unclassified transposons	29	2,155	0.04
Unclassified elements	7	1,192	0.02
Small RNA	2	162	0.00
Satellites	1	41	0.00
Simple repeats	327	15, 514	0.25
Low complexity	1, 000	51, 760	0.84
Total repetitive DNA	4,776	1, 215, 879	19.63

Total number of nucleotides examined: 6, 194, 248.