Table 4. Similarity of barnacle adhesive cDNA and AA sequences between different species.
cp-19k AA | cp-19k DNA | cp-20k AA | cp-20k DNA | cp-100k AA | cp-100k DNA | |
A. improvisus, F. albicostatus | 60% | 49% | ||||
A. improvisus, F. albicostatus, M. rosa | 42–44% | 36–40% | ||||
A. improvisus, F. albicostatus, P. Pollicipes, M. rosa | 26–36% | |||||
F. albicostatus, A. amphitrite | 34–46% | 29–36% | 64% | 49% | ||
F. albicostatus, A. amphitrite, M. rosa | 18–21% | 19–30% | 42–45% | 37–40% | ||
F. albicostatus, A. amphitrite, P. pollicipes, M. rosa | 26–35% |
Similarity was calculated using GeneDoc [41], based on Clustal W alignments created in Mega5 [40]. Similarity is calculated for species pairs, so for groups of more than two species a range of similarity is given. Two variants of cp-20k exist in A. amphitrite and both were included in alignments, resulting in a range of similarity values for the cp-20k two species comparison.