Table 2. Structural characteristics of correlation networks identified by BFS and the three correlation measures: CCC, PCC and r2, in the GWAS data of 74 HHD cases and 70 controls.
CCC | PCC | r2(*) | |||||
---|---|---|---|---|---|---|---|
|
|||||||
Controls | Cases | Controls | Cases | Controls | Cases | ||
Number of Edges | 211,255 | 204,538 | 881,785 | 923,331 | 1,678 | 1,619 | |
| |||||||
Size
of Clusters (†) |
Median | 3 | 3 | 2 | 2 | 2 | 2 |
Average | 5.157 | 4.575 | 2.863 | 2.867 | 2.499 | 2.547 | |
| |||||||
Density of
Clusters |
Median | 1 | 1 | 1 | 1 | 1 | 1 |
Average | 0.911 | 0.901 | 1.000 | 1.000 | 0.998 | 0.998 | |
| |||||||
Number of Clusters with
at Least 3 Nodes |
10,101 | 11,697 | 8,522 | 8,268 | 211 | 191 |
The r2 values are for Chromosome 2 only.
Singletons were not included in the calculations.