Table 1. Distribution of the sequenced reads in the control, wilt- and salt-stressed chickpea libraries.
Library | Control | Wilt Stress | Salt Stress | |||
Total | Unique | Total | Unique | Total | Unique | |
Total number of sequences | 15,744,289 | 6,103,870 | 7,007,282 | 2,677,947 | 6,418,892 | 3,353,754 |
Sequences remaining after 3′ adaptor removal (TCGTAT) | 14,782,514 | 5,033,168 | 6,412,190 | 2,130,060 | 5,761,024 | 2,683,044 |
Sequences remaining after size-range filtering (16 to 30 nt) | 14,689,499 | 5,005,568 | 6,192,469 | 2,054,560 | 5,584,159 | 2,627,840 |
SSR/TR | 1414 | 757 | 222 | 216 | 359 | 307 |
t/rRNA | 720,912 | 35,136 | 645,529 | 37,632 | 538,049 | 32,987 |
Putative small RNA population | 13,940,841 | 4,946,095 | 5,546,371 | 2,016,408 | 5,034,576 | 2,584,961 |