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. 2014 Oct 8;9(10):e109425. doi: 10.1371/journal.pone.0109425

Table 4. Signature nucleotide changes in the regulatory regions of Indian HBV/D4 (IndD4) isolates compared with the previously reported residues at the same position in different subgenotypes of D (D1-D9).

HBV Regulatory region Nucleotide position Nucleotide present in HBV/D subgenotypes
D1 D2 D3 D4 D5 D6 D7 D8 D9 IndD4 [n = 12]
Enhancer I/X promoter [nt 1074–1234] 1126 A A A A A A A A A C
S2 Promoter [∼nt 2971–3127] 3021 A A A A A A A A A G
3033 C C C C C C C C C T
NRE [∼nt 1613–1636] 1633 A/G A A/G A/G A A A/G A A G
1310 C C C C C C C C C T
1321 A/C A A A A/G A A/G A A/C G
1368 G/A A/G G/A G G/A A G G G/A/C C
PRE [∼nt 1151–1684] 1405 C C C C C C C C C T
1407 G G/T G G G G G/T G G A
1577 G G G G G/A G G G G A
1633 A/G A A/G A/G A A A/G A A G

Unique residues of IndD4 are underlined. The major nucleotide substitutions are indicated in bold.