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Sensitivity and specificity of COMET and USEARCH on clinical pol sequences. A data set of 105 752 clinical pol sequences from the LANL HIV database was used for this analysis. The data set includes all PURE and CRF sequences longer than 800 bp, represented by at least 50 sequences, but excludes URFs, which are not classifiable by USEARCH. The USEARCH database was built using the COMET training set. The recombination module of COMET was disabled for this analysis.
