Table 2. A summary of Langmuir binding analysis performed for pd-hGQ12T.
Summary of Langmuir Isotherm fits y = αx/(x + Keq) | ||||||
---|---|---|---|---|---|---|
State | K+ Con. | Effector | Reference state | α (%) | Keq | Figure |
Nt-free | 150 mM | BLM | Folded state | 49 ± 1 | 305 ± 16 nM BLM | Figure 1E |
1 mM ATPγS | 150 mM | BLM | Folded state | 53 ± 3 | 108 ± 24 nM BLM | Figure 1I |
1 mM ADP | 150 mM | BLM | Folded state | 32 ± 1 | 55 ± 5 nM BLM | Figure 1M |
1 μM BLM | 150 mM | ATPγS | 1 μM BLM, Nt-free | 30 ± 4 | 4.2 ± 1.1 μM ATPγS | Figure 2D |
1 μM BLM | 150 mM | ADP | 1 μM BLM, Nt-free | 14 ± 1 | 1.2 ± 0.1 μM ADP | Figure 2H |
1 μM BLM | 150 mM | AMP-PNP | 1 μM BLM, Nt-free | 18 ± 1 | 2.1 ± 0.3 AMP-PNP | Figure S11 |
All assays include 5 mM Mg++ in addition to the indicated K+ concentration. Folded state refers to the state in the presence of the indicated K+ concentration but in the absence of BLM. In the titrations where ATPγS or ADP is the effector, the reference state is selected as the nt-free state in the presence of BLM (at the indicated concentration) to reflect the influence of nucleotide on BLM-mediated GQ unfolding. Note that isotherm fit parameters cannot be compared if the reference state is different. Also, note that the fit parameters for ADP titration at 1 μM BLM, last row of table, represent relative folding rather than unfolding.