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. 2014 Sep 22;42(18):11528–11545. doi: 10.1093/nar/gku856

Table 2. A summary of Langmuir binding analysis performed for pd-hGQ12T.

Summary of Langmuir Isotherm fits y = αx/(x + Keq)
State K+ Con. Effector Reference state α (%) Keq Figure
Nt-free 150 mM BLM Folded state 49 ± 1 305 ± 16 nM BLM Figure 1E
1 mM ATPγS 150 mM BLM Folded state 53 ± 3 108 ± 24 nM BLM Figure 1I
1 mM ADP 150 mM BLM Folded state 32 ± 1 55 ± 5 nM BLM Figure 1M
1 μM BLM 150 mM ATPγS 1 μM BLM, Nt-free 30 ± 4 4.2 ± 1.1 μM ATPγS Figure 2D
1 μM BLM 150 mM ADP 1 μM BLM, Nt-free 14 ± 1 1.2 ± 0.1 μM ADP Figure 2H
1 μM BLM 150 mM AMP-PNP 1 μM BLM, Nt-free 18 ± 1 2.1 ± 0.3 AMP-PNP Figure S11

All assays include 5 mM Mg++ in addition to the indicated K+ concentration. Folded state refers to the state in the presence of the indicated K+ concentration but in the absence of BLM. In the titrations where ATPγS or ADP is the effector, the reference state is selected as the nt-free state in the presence of BLM (at the indicated concentration) to reflect the influence of nucleotide on BLM-mediated GQ unfolding. Note that isotherm fit parameters cannot be compared if the reference state is different. Also, note that the fit parameters for ADP titration at 1 μM BLM, last row of table, represent relative folding rather than unfolding.