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. 2014 Sep 25;15(9):468. doi: 10.1186/s13059-014-0468-1

Table 1.

Global statistics of the N. coriiceps genome assembly

Sequencing platform Insert size Total data (Mb) Sequence coverage (×)
Illumina paired-end 150, 300, 350, 500, 600 bp 47,163 78.6
GS-FLX Mate-pair Single, 3, 8, 20 kb 1,185 2.0
PacBioRS Continuous Long Read 2,318 3.9
Assembly results Number N50 (kb) a ML (kb) b Size (Mb)
Contig 100,606 11.6 226.8 622
Scaffold 38,062 219.1 28,796.7 637
Annotation Number Total length (kb) Percentage of genome
Genes 32,260 47,712 7.5
Repeats 115,561 18.15

aMinimum sequence length in which half of the assembled bases were found.

bMaximum length.