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. 2014 Sep 12;136(40):14068–14077. doi: 10.1021/ja505017f

Table 1. Prediction of the Transmembrane Domain of the ADCK3 Homologs.

name sequence ΔGOcta ΔGAppb TMPREDc Phobiusd TMHMMe ΔG predictorf MemBraing E(z)h
ADCK3 LANFGGLAVGLGFGALA –0.28 +2.11 yes 50% no yes (+1.80) possible (70%) no
ADCK4 LANFGGLAVGLGLGVLA –0.78 +1.91 yes 90% 40% yes (+1.69) yes (80%) no
a

Wimley–White octanol scale (kcal/mol).81

b

Biological hydrophobicity scale (kcal/mol).80,82

f

ΔG predictior80 at http://dgpred.cbr.su.se (in paretheses the ΔGApp for the predicted TM segment, kcal/mol).