Table 2.
The different base-pairings
| j |
i |
|||||
|---|---|---|---|---|---|---|
| I | G | U | C | A | L | |
| I | — | — | 0 | 0.28 | 0.9999 | — |
| G | — | — | 0.41 | 0 | — | — |
| U | — | 0.68 | — | — | 0 | — |
| C | — | 0 | — | — | — | — |
| A | — | — | — | — | — | — |
| L | — | — | — | — | 0.89 | — |
Sij-values are given to the pairing between the first position of the jth anticodon (tRNA) and the third position of the ith codon. Sij-values of WC base pairs are shown in italics, wobble values are shown in bold. Interactions which are not included in the calculation of the tAI are marked with hyphens. Lysidine (L) is a bacterial RNA modification of the DNA nucleotide cytidine (c).44,45