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REs found in the mapped contigs and reads
| Repeat elements | Number of contigs (%) |
|---|---|
| DNA transposons | 679 (45.8) |
| CACTA | 263 (38.7) |
| MITE | 174 (25.6) |
| Tc1/Mariner | 119 (17.5) |
| Other DNA transposons | 57 (8.39) |
| Mutator | 37 (5.4) |
| Harbinger | 29 (4.3) |
| Retroelements | 659 (44.4) |
| LTR/Gypsy | 196 (29.7) |
| Other LTRs | 193 (29.3) |
| LTR/Copia | 152 (23.1) |
| LINE | 116 (17.6) |
| SINE | 2 (0.3) |
| Others | 146 (9.8) |
| Total | 1,484 |
