Table 1.
Statistical summary of rainbow trout spleen sequencing, assembly and annotation.
| Data generation and filtration | |
| Total number of reads | 93,532,200 |
| Total number of duplicates | 35,519,065 (38%) |
| Number of high quality reads | 58,013,135 (62%) |
| Assembly statistics | |
| Number of bases | 49,669,063 |
| Number of long contigs (≥500) | 43,047 |
| Largest contig length (nt) | 14,276 |
| Smallest contig length (nt) | 500 |
| Average contig length (nt) | 1154 |
| N50 (nt) | 1306 |
| Annotation | |
| Total number of annotated contigs | 43,047 |
| Number of contigs with NR hits | 26,333 (61.17%) |
| Number of contigs without NR hits | 16,714 (38.83%) |
| Number of contigs with KEGG hits | 7024 (16.32%) |
| Number of contigs without KEGG hits | 36,023 (83.68%) |