Table 2.
KEGG biochemical mappings for rainbow trout.
| KEGG categories | No. of annotated sequences (%) | Number of KOs |
|---|---|---|
| Metabolism | 2236 | 1496 |
| Carbohydrate metabolism | 453 (20.26) | 281 |
| Lipid metabolism | 349 (15.61) | 220 |
| Amino acid metabolism | 343 (15.34) | 239 |
| Glycan biosynthesis and metabolism | 273 (12.21) | 187 |
| Nucleotide metabolism | 220 (9.84) | 152 |
| Energy metabolism | 189 (8.45) | 132 |
| Metabolism of cofactors and vitamins | 129 (5.77) | 99 |
| Metabolism of other amino acids | 105 (4.70) | 63 |
| Xenobiotic biodegradation and metabolism | 99 (4.43) | 69 |
| Biosynthesis of secondary metabolites | 38 (1.70) | 25 |
| Metabolism of teroenoids and polyketides | 38 (1.70) | 29 |
| Genetic information processing | 1394 | 920 |
| Folding, sorting and degradation | 484 (34.72) | 311 |
| Translation | 459 (32.93) | 283 |
| Replication and repair | 255 (18.29) | 196 |
| Transcription | 196 (14.06) | 130 |
| Environmental information processing | 1830 | 1169 |
| Signal transduction | 1508 (82.40) | 909 |
| Signaling molecules and interaction | 283 (15.46) | 227 |
| Membrane transport | 39 (2.13) | 33 |
| Cellular processes | 1421 | 905 |
| Cell growth and death | 485 (34.13) | 306 |
| Transport and catabolism | 434 (30.54) | 295 |
| Cell communication | 358 (25.19) | 215 |
| Cell motility | 144 (10.13) | 89 |
| Organismal systems | 2825 | 1777 |
| Immune system | 842 (29.81) | 541 |
| Endocrine system | 619 (21.91) | 378 |
| Nervous system | 526 (18.62) | 334 |
| Digestive system | 268 (9.49) | 166 |
| Development | 210 (7.43) | 132 |
| Excretory system | 126 (4.46) | 73 |
| Circulatory system | 103 (3.65) | 69 |
| Environmental adaptation | 88 (3.12) | 56 |
| Sensory system | 43 (1.52) | 28 |
| Total | 9706 | 6267 |