Table 6. List of genes identified from the regions with selective sweeps and their chromosomal location, pooled heterozygosity score and putative functions for channel catfish.
Chromosome | Pooled heterozygosity | Log-transformed Hp | Gene name | Putative function |
Chr 20 | 0 | – | HIF-1β | Stress response |
Chr 5 | 0.012 | 6.38 | ABCB5 | Unknown |
Chr 17 | 0.051 | 4.30 | RAB3GAP1 | Eye/brain development |
Chr 17 | 0.051 | 4.30 | Ubxn4 | ERAD |
Chr 27 | 0.051 | 4.30 | GTF2IRD2 | Transcription factor |
Chr 3 | 0.058 | 4.11 | PRSS16 | T cell development |
Chr 12 | 0.060 | 4.07 | TMEM14C, | Heme biosynthesis |
Chr 12 | 0.060 | 4.07 | MAK | Spermatogenesis |
Chr 1 | 0.061 | 4.03 | MAP4, | Microtuble assembly |
Chr 7 | 0.061 | 4.03 | JUP | Junctional plaque protein |
Chr 20 | 0.062 | 4.01 | TMEM63B | Unknown |