Table 3.
Average (st. dev.) 1 - c-index performance results of cox proportional hazards and random survival forest models as estimated by collating out-of-bag distributions from 100 bootstrap runs
| Model | Average (st.dev.) 1 - c-index | |
|---|---|---|
| BRCA1 | BRCA2 | |
| (i) GPS | 0.468 (0.037)* | 0.417 (0.021)* |
| (ii) GPS + Clin./Demogr. | 0.221 (0.019) | 0.215 (0.018) |
| (iii) SNPs | 0.504 (0.026)* | 0.469 (0.028)* |
| (iv) SNPs + Clin./Demogr. | 0.238 (0.019) | 0.241 (0.019) |
| (v) Clin./Demogr. | 0.222 (0.019) | 0.217 (0.018) |
| (vi) all variables (by AIC) | 0.236 (0.018) | 0.232 (0.019) |
| Random survival forest (all variables) | 0.243 (0.019) | 0.230 (0.019) |
*p > 0.0001 as compared to model (ii) by an adjusted t-test. Values in bold show the best performance.