Table 1.
Strains | Methylobacterium extorquens CM4 | Hyphomicrobium sp. MC1 | Desulfotomaculum alcoholivorax DSM 16058 | Desulfurispora thermophila DSM 16022 | Desulfomonile tiedjei DSM 6799 | Thermincola potens JR | Thermosedimi-nibacter oceani DSM 16646 | Leisingera methylohalidivorans MB2 DSM 14336 |
---|---|---|---|---|---|---|---|---|
Affiliation | Alphaproteobacteria | Alphaproteobacteria | Deltaproteobacteria | Deltaproteobacteria | Deltaproteobacteria | Clostridia | Clostridia | Alphaproteobacteria |
Origin | Industrial soil | Sewage sludge | Fluidized-bed reactor | Fluidized-bed reactor | Sewage sludge | Anodic biofilm | Deep-sea sediment | Sea water |
Genome size (MB) | 6.18 | 4.75 | 3.47 | 2.82 | 6.53 | 3.16 | 2.28 | 4.65 |
GC (%) | 68 | 59 | 47 | 55 | 50 | 46 | 47 | 62 |
Total CDS | 6035 | 4955 | 3588 | 2815 | 5664 | 3343 | 2460 | 4608 |
Plasmids | 2 | 0 | Unknown | Unknown | 1 | 0 | 0 | 2 |
Sequence status | Assembled, finished | Assembled, finished | 66 contigs Permanent draft | 19 contigs Permanent draft | Assembled, finished | Assembled, finished | Assembled, finished | Assembled, finished |
Genbank accession number |
CP001298 CP001299 CP001300 | FQ859181 | AUMW00000000 | AQWN00000000 | CP003360 CP003361 | CP002028 | CP002131 | CP006773 CP006774 CP006775 |
Reference | Marx et al. (2012) | Vuilleumier et al. (2011) | Kaksonen et al. (2008) | Kaksonen et al. (2007) | DeWeerd et al. (1990) | Byrne-Bailey et al. (2010) | Pitluck et al. (2010) | Buddruhs et al. (2013) |