Table 4.
Summary Information of the “Comprehensive Genetic Map”
|
Marshfield
|
deCODE original and interpolated
|
Gaps where markers were interpolated (cM) and (kb)
|
|||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Chromosome | Physical distance spanned (kb) | No. of markers | Distance spanned (cM) | Average spacing (cM) | No. of markers | Distance spanned (cM) | Average spacing (cM) | Mean | Max. | Mean | Max. |
| 1 | 245,963 | 687 | 289.66 | 0.42 | 667 | 276.40 | 0.42 | 0.87 | 4.97 | 969 | 23,665 |
| 2 | 243,243 | 657 | 269.07 | 0.41 | 635 | 266.79 | 0.42 | 1.03 | 4.23 | 1087 | 9342 |
| 3 | 199,130 | 549 | 231.27 | 0.42 | 548 | 221.83 | 0.40 | 0.96 | 5.03 | 859 | 3975 |
| 4 | 191,136 | 466 | 211.65 | 0.46 | 456 | 204.74 | 0.45 | 1.03 | 6.5 | 983 | 4185 |
| 5 | 180,458 | 493 | 197.54 | 0.40 | 479 | 205.69 | 0.43 | 1.13 | 7.47 | 1016 | 5204 |
| 6 | 170,695 | 480 | 193.14 | 0.40 | 465 | 189.60 | 0.41 | 1.07 | 6.43 | 961 | 6232 |
| 7 | 157,015 | 440 | 181.97 | 0.41 | 428 | 187.09 | 0.43 | 1.93 | 36.23 | 1042 | 4686 |
| 8 | 146,149 | 408 | 194.32 | 0.48 | 399 | 166.08 | 0.42 | 1.19 | 6.19 | 1117 | 5106 |
| 9 | 136,236 | 309 | 168.98 | 0.55 | 298 | 160.01 | 0.54 | 1.12 | 5.45 | 1054 | 5177 |
| 10 | 134,677 | 440 | 173.13 | 0.39 | 420 | 179.12 | 0.42 | 1.14 | 5.11 | 868 | 3677 |
| 11 | 133,704 | 404 | 147.77 | 0.37 | 398 | 152.45 | 0.38 | 0.95 | 7.1 | 841 | 4590 |
| 12 | 131,939 | 404 | 170.66 | 0.42 | 391 | 171.96 | 0.44 | 1.09 | 4.5 | 928 | 6007 |
| 13 | 112,931 | 255 | 114.98 | 0.45 | 250 | 129.52 | 0.52 | 1.25 | 5.05 | 896 | 2698 |
| 14 | 103,950 | 264 | 138.18 | 0.50 | 251 | 124.81 | 0.48 | 1.13 | 5.87 | 763 | 2183 |
| 15 | 100,070 | 213 | 122.14 | 0.58 | 203 | 133.61 | 0.66 | 1.55 | 8.29 | 1089 | 2972 |
| 16 | 89,242 | 276 | 134.12 | 0.49 | 266 | 130.00 | 0.49 | 1.37 | 7.3 | 1009 | 15,264 |
| 17 | 81,287 | 313 | 126.46 | 0.41 | 297 | 137.99 | 0.46 | 1.16 | 5.75 | 716 | 4534 |
| 18 | 75,963 | 231 | 126.00 | 0.55 | 218 | 121.65 | 0.56 | 1.17 | 4.12 | 830 | 4231 |
| 19 | 63,727 | 237 | 105.02 | 0.45 | 218 | 109.73 | 0.51 | 1.42 | 7.58 | 876 | 10,696 |
| 20 | 59,563 | 228 | 101.22 | 0.45 | 220 | 98.63 | 0.45 | 0.99 | 3.97 | 722 | 5060 |
| 21 | 46,894 | 114 | 61.40 | 0.54 | 114 | 78.48 | 0.66 | 1.84 | 7.42 | 829 | 1722 |
| 22 | 48,058 | 107 | 142.83 | 1.35 | 103 | 70.60 | 0.69 | 1.82 | 8.88 | 1101 | 3616 |
| X | 153,510 | 271 | 206.74 | 0.77 | 261 | 190.67 | 0.73 | 1.68 | 6.51 | 1352 | 5345 |
| Total | 3,005,542 | 8246 | 3808 | 0.51 | 7985 | 3707 | 0.49 | 1.26 | 7.39 | 953 | 6094 |
The distances spanned by the physical, Marshfield, and deCode map (including markers with interpolated recombination values), number of markers and mean marker spacing for the genetic maps, and mean and maximum gaps between original deCODE recombination rates where markers were interpolated are shown for all chromosomes.