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. 2002 Sep 20;71(4):906–922. doi: 10.1086/342928

Table A7.

Primer Pairs Used for PCR Amplification of Deletion Junctions[Note]

Patient(s) PrimerIdentificationNumbers Forward Primer Reverse Primer Deletion-JunctionProduct Size(bp)
AMC0110 10821/6 GGCAAGTTTCACAATCTGCTG CAAAGATGCAGGTACTGCTCTGC 1,534
WHT4396 10827/12088 TCTTGATCAATGCCTTGTGAAAT CCACTGTAAGTCTGACGGGG 740
WHT2943a 11189/90 ACTAAATGCCCACAGGAGAAAA TTGTCATGGATATCCCATCCA 976
WHT3410a 11075/115 GGTCTTCTCACGTAATCCCG TGTCCTGGATGGTAATGCC 754
WHT3516, WHT3642, WHT4426, and WHT4486 10824/916b CAAAGATGCGGGTACTGCTCTAT ATTGGCAAGTTTCATAATCTGCTA 1,537
WHT2825 11086/7 TGAGCATAAGTTTGTTTCGGG CGAGGATGTCAATGTTTTGC 421

Note.— For PCR conditions, see sY1201 (GenBank).

a

We first used long-range PCR (table A8) and then, based on the sequence of the long-range PCR product, designed the primers shown in this table.

b

Annealing at 63°C.