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. 2014 Oct 16;2(5):e01058-14. doi: 10.1128/genomeA.01058-14

TABLE 1.

Characteristics of 10 Exiguobacterium draft genomes

Organisma Isolation source Sequencing and assembly methods Size (Mb) G+C content (%) No. of CDSs No. of rrn operons No. of tRNAs No. of Transposases No. of cold shock genes GenBank accession no. No. of contigs
E. acetylicum DSM 20416T Creamery waste, UK PacBio, HGAP 3.28 47 3,323 9 69 40 3 JNIR00000000 3
E. oxidotolerans JCM 12280T Fish drain, Japan PacBio, HGAP 3.09 47 3,053 9 69 34 6 JNIS00000000 3
E. undae DSM 14481T Garden pond, Germany Illumina, AllPaths-LG 3.25 48 3,287 4 56 12 2 JHZV00000000 4
E. antarcticum DSM 14480T Microbial mat, Antarctica PacBio, HGAP 3.22 47 3,250 10 69 89 7 JMKS00000000 7
E. sibiricum 7-3 Permafrost, Siberia, Russia Illumina, AllPaths-LG 3.08 47 3,141 4 48 9 3 JHZS00000000 7
E. undae 190-11 Permafrost, Siberia, Russia Illumina, AllPaths-LG 3.21 48 3,236 5 61 17 3 JHZU00000000 4
E. aurantiacum DSM 6208T Potato wash, UK PacBio, HGAP 3.04 53 3,067 9 67 90 2 JNIQ00000000 2
E. marinum DSM 16307T Marine, Yellow Sea, South Korea Illumina, AllPaths-LG 2.81 47 2,836 8 60 15 2 JHZT00000000 2
Exiguobacterium sp. GIC31 Glacier ice, Greenland PacBio, HGAP 2.97 52 3,005 9 67 38 2 JNIP00000000 2
Exiguobacterium sp. NG55 Hot spring, Yellowstone Park, USA PacBio, HGAP 3.14 48 3,169 11 68 27 2 JPOD00000000 5
a

Type strains (T) were obtained from the German Collection of Microorganisms and Cell Cultures (DSM) or Japan Collection of Microorganisms (JCM).