Skip to main content
. 2014 Aug 26;289(42):29086–29096. doi: 10.1074/jbc.M114.595363

TABLE 1.

Apparent kinetic parameters determined for EcDmlA on different substrates and in the presence of different divalent metal ions

The concentration of Mn2+ was fixed at 5 mm for all measurements. The measurements were done at 25 °C and pH 7.5 in the presence of 150 mm KCl. The rate versus substrate concentration data are presented in Fig. 6. ND, not determined.

EcDmlA
PpTDHc
kcat Km(substrate)a kcat/Km(substrate) Km(NAD)b kcat/Km(NAD) kcat/Km(substrate)
s1 μm m1 s1 μm m1 s1 m1 s1
d-Malated 11.7 ± 0.3 96 ± 7 1 × 105 94 ± 8 1 × 105 2 × 105
3-Isopropylmalated 0.102 ± 0.003 24 ± 3 4 × 103 70 ± 3 2 × 103 1 × 104
l(+)-Tartrated 0.26 ± 0.01 567 ± 84 5 × 102 600 ± 200 5 × 102 4 × 102
d-Isocitratef (5.4 ± 0.2) × 10−4 1300 ± 125 4 × 10−1 ND ND ND
d(−)-Tartratef,g ND ≥8000 3 × 10−1 ND ND ND
d-Lactatef,g ND ≥14,000 1 × 10−1 ND ND ND

a Apparent Km for the specified substrate with a fixed concentration of NAD.

b Apparent Km for NAD with a fixed concentration of the specified substrate.

c Data are taken from Ref. 33.

d For these substrate, the concentration of NAD was fixed at 500 μm for the Km(substrate) measurements, and the concentration of substrates was fixed at 500 μm for the Km(NAD) measurements.

e For l(+)-tartrate, the concentration of NAD was fixed at 2 mm for the Km(substrate) measurements, and the concentration of substrates was fixed at 5 mm for the Km(NAD) measurements.

f For these substrates, the concentration of NAD was fixed at 1 mm to obtain apparent kcat/Km(substrate).

g Because of the high Km(substrate), the kinetic parameters could not be obtained for these substrates, and the kcat/Km(substrate) values were estimated from the linear part of the Michaelis-Menten function.