Table 2.
Results of chi-square tests, as well as their error probabilities (P), for associations of intragenic KIT marker genotypes (49774, KIT10, KIT3) and markers flanking KIT (KKDR4, KKDR5, PDGFRA1, PDGFRA3) with the BEW phenotype. All tests were 2-sided with an α value of 0.05 and used 40 unrelated individuals
| Trait | Marker | χ2 | Chi-square P value | Fisher’s exact test P value |
|---|---|---|---|---|
| BEW | PDGFRA1 | 6.728 | 0.0095 (0.0665) | 0.0252 (0.1764) |
| BEW | PDGFRA3 | 0.02724 | 0.8689 (>1.00) | 1.000 (>1.00) |
| BEW | 49774 | 21.56 | <0.0001 (<0.0007) | <0.0001 (<0.0007) |
| BEW | KIT10 | 12.82 | 0.0003 (0.021) | 0.0009 (0.0063) |
| BEW | KIT3 | 10.61 | 0.0011 (0.0077) | 0.0024 (0.0168) |
| BEW | KKDR4 | 2.332 | 0.1267 (0.8869) | 0.1642 (>1.00) |
| BEW | KKDR5 | 2.692 | 0.1009 (0.7063) | 0.1872 (>1.00) |
Bonferroni corrected P values are provided in brackets () alongside raw P values.