Table 3.
Population diversity and structure within SLCV and WmCSV samples in this study
| Collection site | SLCV | WmCSV | |||||
|---|---|---|---|---|---|---|---|
| Number of sequences | π | F ST | Number of sequences | π | F ST | ||
| Egypt | 15 | 0.0093 | 0.0638 | ||||
| 1 | 7 | 0.012 | |||||
| 2 | 8 | 0.0060 | |||||
| Israel | 38 | 0.0081 | 0.0146 | 31 | 0.0066 | 0.183 | |
| 1 | 13 | 0.012 | 9 | 0.0064 | |||
| 2 | 12 | 0.0056 | 11 | 0.0043 | |||
| 3 | 13 | 0.0061 | 11 | 0.0064 | |||
| Jordan | 59 | 0.0040 | 0* | 56 | 0.0058 | 0.311 | |
| 1 | 20 | 0.0042 | 17 | 0.0018 | |||
| 2 | 20 | 0.0041 | 19 | 0.0060 | |||
| 3 | 19 | 0.0042 | 20 | 0.0054 | |||
| Lebanon | 11 | 0.0122 | 0.0193 | ||||
| 1 | 1 | ||||||
| 2 | 3 | 0.012 | |||||
| 3 | 6 | 0.012 | |||||
| 4 | 1 | ||||||
| Palestine | 26 | 0.0047 | 0.116 | 19 | 0.0055 | 0.462 | |
| 1 | 10 | 0.0053 | 10 | 0.0029 | |||
| 2 | 10 | 0.0029 | 9 | 0.0048 | |||
| 3 | 6 | 0.0048 | |||||
| All | 149 |
0.0077
± 0.00077 |
0.253 | 106 | 0.0066 ± 0.00019 | 0.151 | |
Fst is the fixation index, π is per-site, pairwise nucleotide diversity.
*This Fst value was negative, rounded to zero.