Table 3. A representative list of CpG sites that showed significant increased hypomethylation in DU-145 cells after treatment with 5-Aza 2′ –deoxycitidine (DAC).

Gene Symbol	Gene Name	CpG Location	p value
CNTNAP5	contactin associated protein-like 5	Intragenic	4.74E-06
KIAA0415	adaptor-related protein complex 5, zeta 1 subunit	Intragenic	1.00E-04
SOGA2	SOGA Family Member 2	Intragenic	7.00E-04
ZNF418	zinc finger protein 418	Intragenic	1.70E-03
TBX15	T-box 15	Intragenic	1.80E-03
B4GALNT1	Beta-1,4-N-Acetyl-Galactosaminyl Transferase 1	Intragenic	1.90E-03
CENPM	centromere protein M	Promoter	3.30E-03
FIGN	fidgetin	Promoter	3.30E-03
ARRDC2	arrestin domain containing 2	Promoter	3.30E-03
OBSCN	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF	Intragenic	3.50E-03
HOXD3	homeobox D3	Intragenic	3.70E-03
MMP17	matrix metallopeptidase 17 (membrane-inserted)	Intragenic	5.30E-03
CRB2	crumbs homolog 2 (Drosophila)	Intragenic	5.90E-03
MARK3	MAP/microtubule affinity-regulating kinase 3	Intragenic	1.71E-02
CYP26A1	cytochrome P450, family 26, subfamily A, polypeptide 1	Intragenic	2.23E-02
GSTP1	glutathione S-transferase pi 1	Intragenic	2.66E-02
PDZD4	PDZ domain containing 4	Intragenic	3.12E-02
KLK12	kallikrein-related peptidase 12	Intragenic	3.19E-02
IRX2	iroquois homeobox 2	Intragenic	3.31E-02
ADCYAP1	adenylate cyclase activating polypeptide 1 (pituitary)	Intragenic	3.37E-02
MEX3B	mex-3 RNA binding family member B	Intragenic	3.48E-02
GPR135	G protein-coupled receptor 135	Intragenic	3.49E-02
COL9A3	collagen, type IX, alpha 3	Intragenic	3.99E-02
MAST1	microtubule associated serine/threonine kinase 1	Intragenic	4.57E-02
ACTA1	actin, Alpha 1, Skeletal Muscle	Promoter	4.88E-02