Table 3.
QTL IDa | Chrb | Startb | Endb | Trait category | Trait name | Gene IDc | Corresponding DES |
---|---|---|---|---|---|---|---|
AQE036 | Chr2 | 2105542 | 2105840 | Yield | Grain yield per panicle | LOC_Os02g04680 | osa-miR156/535 |
AQE049 | Chr2 | 2105542 | 2105840 | Yield | 100-Seed weight | LOC_Os02g04680 | osa-miR156/535 |
AQFJ005 | Chr8 | 2114843 | 2115100 | Yield | Grain yield per plant | LOC_Os08g04310 | osa-miR528 |
AQFJ015 | Chr8 | 2114843 | 2115100 | Yield | Panicle tiller ratio | LOC_Os08g04310 | osa-miR528 |
AQGS037 | Chr8 | 2114843 | 2115100 | Yield | Grain yield | LOC_Os08g04310 | osa-miR528 |
AQGS069 | Chr8 | 2114843 | 2115100 | Yield | Grain yield | LOC_Os08g04310 | osa-miR528 |
AQFP005 | Chr5 | 27976107 | 27977104 | Anatomy | Culm thickness | LOC_Os05g48870 | OsTAS3-ta-siARF |
AQFP027 | Chr5 | 27976107 | 27977104 | Anatomy | Culm thickness | LOC_Os05g48870 | OsTAS3-ta-siARF |
AQGM008 | Chr10 | 18014265 | 18014633 | Anatomy | Culm length | LOC_Os10g33960 | osa-miR166 |
a QTL in the Gramene database (Youens-Clark et al., 2011).
b Genomic coordinates of QTL. Chr, Chromosome.
c DES target gene loci mapped in the QTL.