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. 2014 Aug 27;27(10):1837–1852. doi: 10.1021/tx5002755

Table 3. Steady-State Kinetic Parameters for dNTP Incorporation Opposite 8-oxoG by Wild-Type and Variant hPols ι(1-445) in the Presence of 5 mM Mg2+.

pol ι(1–445) dNTP Km (μM) kcat (s–1) kcat/Km (s–1 mM–1) finsa relative efficiencyb
wild-type A 1300 ± 200 0.00081 ± 0.00005 0.00062 0.077  
  T 1600 ± 300 0.0027 ± 0.0002 0.0017 0.27  
  G 230 ± 40 0.0032 ± 0.0001 0.014 1.7  
  C 1600 ± 300 0.013 ± 0.001 0.0081 1 1
Δ1–25 A 530 ± 80 0.0034 ± 0.00017 0.0064 0.13  
  T 510 ± 70 0.0074 ± 0.0003 0.015 0.31  
  G 120 ± 10 0.0061 ± 0.00014 0.051 1.1  
  C 1200 ± 100 0.057 ± 0.002 0.048 1 5.9
ΔD17 A 1000 ± 200 0.00088 ± 0.00005 0.00088 0.14  
  T 2400 ± 200 0.0046 ± 0.0001 0.0019 0.30  
  G 530 ± 50 0.0062 ± 0.0002 0.012 1.9  
  C 4000 ± 900 0.025 ± 0.003 0.0063 1 0.78
R96G A 840 ± 30c 0.000072 ± 0.000008 0.000086 0.36  
  T 290 ± 70 0.00018 ± 0.00001 0.00062 2.6  
  G 160 ± 20c 0.00010 ± 0.000003 0.00063 2.6  
  C 1900 ± 400 0.00045 ± 0.00004 0.00024 1 0.030
I261M A 820 ± 110 0.00075 ± 0.00003 0.00092 0.21  
  T 1400 ± 300 0.0028 ± 0.0002 0.0020 0.47  
  G 320 ± 20 0.0044 ± 0.0001 0.014 3.3  
  C 2100 ± 300 0.0090 ± 0.0005 0.0043 1 0.53
E276K A 1500 ± 100 0.0010 ± 0.00002 0.00066 0.11  
  T 2200 ± 200 0.0055 ± 0.0002 0.0025 0.43  
  G 920 ± 30 0.012 ± 0.0001 0.013 2.2  
  C 3800 ± 200 0.022 ± 0.001 0.0058 1 0.72
Y374N A 1000 ± 100 0.00061 ± 0.00003 0.00061 0.086  
  T 1200 ± 200 0.0023 ± 0.0001 0.0019 0.27  
  G 260 ± 20 0.0030 ± 0.0001 0.013 1.8  
  C 1700 ± 800 0.012 ± 0.002 0.0071 1 0.88
a

Misinsertion frequency, calculated by dividing kcat/Km for dNTP incorporation by the kcat/Km for dCTP incorporation opposite 8-oxoG. All values are presented to two significant digits.

b

Relative efficiency, calculated by dividing kcat/Km of each pol ι(1–445) for dCTP incorporation opposite 8-oxoG by kcat/Km of wild-type pol ι(1–445) for dCTP incorporation opposite 8-oxoG.

c

The apparent Km value, determined under the condition where the amount of enzyme is greater than the amount of DNA and thus is not strictly steady-state.