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. 2014 Aug 27;27(10):1837–1852. doi: 10.1021/tx5002755

Table 7. Steady-State Kinetic Parameters for dNTP Incorporation Opposite Abasic Site by Wild-Type and Variant hPols ι(1-445) in the Presence of 0.15 mM Mn2+.

pol ι(1–445) dNTP Km (μM) kcat (s–1) kcat/Km (s–1 mM–1) dNTP selectivity ratioa relative efficiencyb
wild-type A 0.68 ± 0.04 0.012 ± 0.0001 18 0.18  
  T 1.5 ± 0.1 0.064 ± 0.001 43 0.43  
  G 0.29 ± 0.06 0.029 ± 0.001 100 1 1
  C 2.8 ± 0.1 0.066 ± 0.001 24 0.24  
Δ1–25 A 0.50 ± 0.06 0.010 ± 0.003 20 0.22  
  T 1.1 ± 0.1 0.024 ± 0.001 22 0.24  
  G 0.099 ± 0.005 0.0091 ± 0.0001 92 1 0.92
  C 0.98 ± 0.08 0.043 ± 0.001 44 0.48  
ΔD17 A 0.83 ± 0.13 0.016 ± 0.001 19 0.31  
  T 1.8 ± 0.2 0.048 ± 0.001 27 0.44  
  G 0.34 ± 0.04 0.021 ± 0.0004 62 1 0.62
  C 1.8 ± 0.3 0.11 ± 0.004 61 0.98  
R96G A 1.9 ± 0.3 0.011 ± 0.0004 5.8 0.76  
  T 1.9 ± 0.2 0.0088 ± 0.0002 4.6 0.61  
  G 0.49 ± 0.06 0.0037 ± 0.0001 7.6 1 0.076
  C 3.4 ± 0.3 0.015 ± 0.0004 4.4 0.58  
I261M A 0.35 ± 0.05 0.021 ± 0.001 60 0.50  
  T 1.3 ± 0.09 0.026 ± 0.0004 20 0.17  
  G 0.27 ± 0.02 0.032 ± 0.001 120 1 1.2
  C 2.5 ± 0.4 0.050 ± 0.002 20 0.17  
E276K A 0.72 ± 0.11 0.017 ± 0.001 24 0.39  
  T 2.7 ± 0.3 0.028 ± 0.0007 10 0.16  
  G 0.34 ± 0.02 0.021 ± 0.0002 62 1 0.62
  C 2.2 ± 0.1 0.041 ± 0.0005 19 0.31  
Y374N A 0.71 ± 0.09 0.026 ± 0.001 37 0.38  
  T 2.0 ± 0.2 0.082 ± 0.002 41 0.42  
  G 0.39 ± 0.03 0.038 ± 0.001 97 1 0.97
  C 3.3 ± 0.3 0.047 ± 0.001 14 0.14  
a

dNTP selectivity ratio, calculated by dividing kcat/Km for each dNTP incorporation by the highest kcat/Km for dNTP incorporation opposite the abasic site. All values are presented to two significant digits.

b

Relative efficiency, calculated by dividing kcat/Km of each pol ι(1–445) for dGTP incorporation opposite the abasic site by kcat/Km of wild-type pol ι(1–445) for dGTP incorporation opposite the abasic site.