Table 1.
GO analysis for the top 2000 mouse and rat dendritic expressed genes
| (A) GO analysis for the top 2000 mouse dendritic expressed genes | |||
|---|---|---|---|
| Category | GO_Term | GO_Description | FDR |
| Biological process | GO:0009987 | Cellular process | 4.5E-26 |
| GO:0044237 | Cellular metabolic process | 4.8E-10 | |
| GO:0006412 | Translation | 1.1E-06 | |
| GO:0051179 | Localization | 5.3E-06 | |
| GO:0006091 | Generation of precursor metabolites and energy | 1.9E-05 | |
| GO:0007399 | Nervous system development | 1.7E-04 | |
| GO:0022900 | Electron transport chain | 8.5E-04 | |
| GO:0006810 | Transport | 1.1E-03 | |
| GO:0019538 | Protein metabolic process | 2.1E-02 | |
| GO:0006119 | Oxidative phosphorylation | 3.7E-02 | |
| GO:0022008 | Neurogenesis | 4.0E-02 | |
| Cellular component | GO:0005840 | Ribosome | 5.3E-09 |
| GO:0030529 | Ribonucleoprotein complex | 1.8E-07 | |
| GO:0043227 | Membrane-bounded organelle | 1.8E-07 | |
| GO:0043228 | Non-membrane-bounded organelle | 2.5E-07 | |
| GO:0043232 | Intracellular non-membrane-bounded organelle | 2.5E-07 | |
| GO:0070469 | Respiratory chain | 7.7E-07 | |
| GO:0031966 | Mitochondrial membrane | 8.3E-07 | |
| GO:0005740 | Mitochondrial envelope | 4.4E-06 | |
| GO:0019866 | Organelle inner membrane | 6.2E-06 | |
| GO:0005743 | Mitochondrial inner membrane | 6.3E-06 | |
| GO:0031090 | Organelle membrane | 2.6E-05 | |
| GO:0031967 | Organelle envelope | 2.6E-05 | |
| GO:0044429 | Mitochondrial part | 3.1E-05 | |
| GO:0005856 | Cytoskeleton | 4.3E-04 | |
| Molecular function | GO:0005198 | Structural molecule activity | 1.5E-07 |
| GO:0005515 | Protein binding | 3.8E-06 | |
| GO:0015077 | Monovalent inorganic cation transmembrane transporter activity | 5.2E-02 | |
| GO:0003954 | NADH dehydrogenase activity | 7.4E-02 | |
| GO:0008137 | NADH dehydrogenase (ubiquinone) activity | 7.4E-02 | |
| GO:0050136 | NADH dehydrogenase (quinone) activity | 7.4E-02 | |
| GO:0015078 | Hydrogen ion transmembrane transporter activity | 7.8E-02 | |
| (B) GO analysis for the top 2000 rat dendritic expressed genes | |||
| Category | GO_Term | GO_Description | FDR |
| Biological process | GO:0009987 | Cellular process | 5.84E-31 |
| GO:0006414 | Translational elongation | 1.13E-04 | |
| GO:0007399 | Nervous system development | 1.76E-04 | |
| GO:0034621 | Cellular macromolecular complex subunit organization | 2.50E-04 | |
| GO:0022008 | Neurogenesis | 1.22E-03 | |
| GO:0034622 | Cellular macromolecular complex assembly | 3.06E-03 | |
| GO:0051179 | Localization | 1.12E-08 | |
| GO:0006810 | Transport | 2.09E-07 | |
| GO:0001568 | Blood vessel development | 3.56E-03 | |
| GO:0048514 | Blood vessel morphogenesis | 6.73E-03 | |
| Cellular component | GO:0043234 | Protein complex | 4.38E-06 |
| GO:0031090 | Organelle membrane | 1.59E-05 | |
| GO:0043005 | Neuron projection | 8.96E-05 | |
| GO:0005740 | Mitochondrial envelope | 1.19E-04 | |
| GO:0031966 | Mitochondrial membrane | 1.28E-04 | |
| GO:0044445 | Cytosolic part | 1.83E-04 | |
| GO:0022626 | Cytosolic ribosome | 4.25E-04 | |
| GO:0022627 | Cytosolic small ribosomal subunit | 8.11E-04 | |
| GO:0044429 | Mitochondrial part | 2.95E-03 | |
| GO:0015935 | Small ribosomal subunit | 5.33E-03 | |
| GO:0019866 | Organelle inner membrane | 1.68E-02 | |
| GO:0070469 | Respiratory chain | 2.09E-02 | |
| GO:0005743 | Mitochondrial inner membrane | 3.53E-02 | |
| GO:0043228 | Non-membrane-bounded organelle | 4.89E-02 | |
| GO:0043232 | Intracellular non-membrane-bounded organelle | 4.89E-02 | |
| Molecular function | GO:0005515 | Protein binding | 9.71E-25 |
| GO:0005516 | Calmodulin binding | 2.09E-02 | |
| GO:0015078 | Hydrogen ion transmembrane transporter activity | 3.35E-02 | |
| GO:0015077 | Monovalent inorganic cation transmembrane transporter activity | 7.52E-02 | |
GO analysis for the top2000 ranked dendritic genes in mouse (A) and rat (B) with FDR < 0.1 used as threshold value.
GO categories in "bold" correspond to categories found commonly in rat and mouse.