Table 4.
List of SNPs identified in Arabis alpina plastome genes.
| Position | Protein | Base change | Amino acid | Function |
|---|---|---|---|---|
| 6543 | psbK | T/C | A/A | Photosystem II |
| 11245 | atpF | G/T | H/Q | ATP synthase |
| 14350 | rps2 | C/G | E/D | Small subunit ribosomal protein |
| 15306 | rpoC2 | A/G | F/C | RNA polymerase |
| 16295 | G/A | N/N | ||
| 16474 | G/A | P/A | ||
| 17307 | A/C | I/R | ||
| 20512 | rpoC1 | T/C | L/L | RNA polymerase |
| 22005 | C/T | G/S | ||
| 24729 | rpoB | T/C | K/K | RNA polymerase |
| 34855 | psbZ | C/T | F/F | Photosystem II |
| 39586 | psaA | C/T | L/L | Photosystem I |
| 47964 | ndhK | A/C | S/A | NADH oxidoreductase |
| 58892 | ycf4 | G/A | A/T | Protein of unknown function |
| 59442 | cemA | G/T | W/L | Chloroplast envelope membrane protein |
| 60485 | petA | C/A | V/V | Cytochrome B6/f |
| 66051 | rps18 | A/C | I/I | Small subunit ribosomal protein |
| 66267 | G/T | T/T | ||
| 66674 | rpl20 | G/T | L/I | Large subunit ribosomal protein |
| 66794 | T/C | S/G | ||
| 69066 | clpP | A/G | F/F | Protease |
| 71867 | psbB | C/T | S/S | Photosystem II |
| 76906 | rpoA | C/T | R/K | RNA Polymerase |
| 78533 | rps8 | C/T | D/N | Small subunit ribosomal protein |
| 81021 | rps3 | G/T | G/G | Small subunit ribosomal protein |
| 81699 | rpl22 | C/T | C/Y | Large subunit ribosomal protein |
| 81890 | G/T | F/L | ||
| 85215 | ycf2 | G/T | C/F | Proteins of unknown function |
| 108838 | ndhF | T/A | I/M | NADH oxidoreductase |
| 110679 | A/C | Y/D | ||
| 113079 | ccsA | T/G | F/L | Cytochrome c biogenesis protein |
| 118680 | ndhA | G/A | N/N | NADH oxidoreductase |
| 121810 | rps15 | T/C | R/G | Small subunit ribosomal protein |
| 125941 | ycf1 | G/A | S/L | Protein of unknown function |
| 125954 | C/T | E/K | ||
| 126332 | T/C | T/A | ||
| 149991 | ycf2 | C/A | C/F | Protein of unknown function |