Table 5.
S. No. | Haplotype |
Haplotype frequency (%) |
OR (95% CI) | P value | |
Patients (n = 195) | Controls (n = 150) | ||||
1 | G G T G G G | 43.1 | 43.3 | ~1 | ~1 |
2 | A T C T G A | 30.3 | 31.3 | 0.95 (0.5-1.82) | 0.88 |
3 | G T T G T G | 19.0 | 17.3 | 1.15 (0.52-2.5) | 0.33 |
4 | G G T T G G | 2.1 | 2.0 | ~1 | ~1 |
OR: Odds ratio; 95% CI: 95% confidence interval; Haplotypes generated using six SNPs with minor allele frequency of > 3%, haplotypes with frequency > 2% are presented; Order of SNPs; G-938A, T-912G, T-385C, T-243G, G209T, G2199A in the reference sequence.